Table 1.

Summary data for familial pancreatic cancer families with inactivating ATM variants

TypeFamilyIndividualRead lengthBases mapped to genomeBases mapped to exomeExome bases with ≥ 10 readsAverage raw coverageEffective coverageTotal number of variantsVariants in SNP database
Whole-genome sequencingFPC-A1100115,388,854,3001,294,030,42734,681,6023595.1%6,024,8663,758,900
2100110,742,763,0001,219,892,54634,328,8893394,7%6,181,3693,793,150
3100112,771,643,5001,271,909,14034,656,8413495.1%6,190,8923,783,971
Whole-exome sequencingFPC-B1758,110,266,6754,118,378,29536,458,59310997.9%35,67419,573
2757,597,985,8504,076,171,30936,560,36510898.0%35,72419,605
3755,649,542,1002,815,928,67236,067,7527497.6%34,92319,554