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Research Articles

The Genomic Landscape of Pediatric Ewing Sarcoma

Brian D. Crompton, Chip Stewart, Amaro Taylor-Weiner, Gabriela Alexe, Kyle C. Kurek, Monica L. Calicchio, Adam Kiezun, Scott L. Carter, Sachet A. Shukla, Swapnil S. Mehta, Aaron R. Thorner, Carmen de Torres, Cinzia Lavarino, Mariona Suñol, Aaron McKenna, Andrey Sivachenko, Kristian Cibulskis, Michael S. Lawrence, Petar Stojanov, Mara Rosenberg, Lauren Ambrogio, Daniel Auclair, Sara Seepo, Brendan Blumenstiel, Matthew DeFelice, Ivan Imaz-Rosshandler, Angela Schwarz-Cruz y Celis, Miguel N. Rivera, Carlos Rodriguez-Galindo, Mark D. Fleming, Todd R. Golub, Gad Getz, Jaume Mora and Kimberly Stegmaier
Brian D. Crompton
1Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts.
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Chip Stewart
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Amaro Taylor-Weiner
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Gabriela Alexe
1Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts.
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
3Bioinformatics Graduate Program, Boston University, Boston, Massachusetts.
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Kyle C. Kurek
4Department of Pathology, Boston Children's Hospital, Boston, Massachusetts.
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Monica L. Calicchio
4Department of Pathology, Boston Children's Hospital, Boston, Massachusetts.
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Adam Kiezun
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Scott L. Carter
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Sachet A. Shukla
5Cancer Vaccine Center, Dana-Farber Cancer Institute, Boston, Massachusetts.
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Swapnil S. Mehta
1Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts.
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Aaron R. Thorner
1Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts.
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Carmen de Torres
6Department of Pediatric Oncology, Hospital Sant Joan de Déu, Barcelona, Spain.
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Cinzia Lavarino
6Department of Pediatric Oncology, Hospital Sant Joan de Déu, Barcelona, Spain.
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Mariona Suñol
6Department of Pediatric Oncology, Hospital Sant Joan de Déu, Barcelona, Spain.
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Aaron McKenna
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Andrey Sivachenko
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Kristian Cibulskis
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Michael S. Lawrence
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Petar Stojanov
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
7Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
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Mara Rosenberg
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Lauren Ambrogio
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Daniel Auclair
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Sara Seepo
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Brendan Blumenstiel
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Matthew DeFelice
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Ivan Imaz-Rosshandler
8Instituto Nacional de Medicina Genómica, Mexico City, Mexico.
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Angela Schwarz-Cruz y Celis
8Instituto Nacional de Medicina Genómica, Mexico City, Mexico.
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Miguel N. Rivera
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
9Department of Pathology, Massachusetts General Hospital, Boston, Massachusetts.
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Carlos Rodriguez-Galindo
1Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts.
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Mark D. Fleming
4Department of Pathology, Boston Children's Hospital, Boston, Massachusetts.
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Todd R. Golub
1Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts.
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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Gad Getz
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
9Department of Pathology, Massachusetts General Hospital, Boston, Massachusetts.
10Massachusetts General Hospital Cancer Center, Massachusetts General Hospital, Boston, Massachusetts.
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Jaume Mora
6Department of Pediatric Oncology, Hospital Sant Joan de Déu, Barcelona, Spain.
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Kimberly Stegmaier
1Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts.
2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
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  • For correspondence: kimberly_stegmaier@dfci.harvard.edu
DOI: 10.1158/2159-8290.CD-13-1037 Published November 2014
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Article Information

Volume 4, Issue 11, pp. 1326-1341

DOI 
https://doi.org/10.1158/2159-8290.CD-13-1037
PubMed 
25186949

Published By 
American Association for Cancer Research
Print ISSN 
2159-8274
Online ISSN 
2159-8290
History 
  • Received December 26, 2013
  • Revision received August 19, 2014
  • Accepted August 29, 2014
  • Published first September 3, 2014.

Article Versions

  • Previous version (September 3, 2014 - 07:37).
  • Previous version (October 15, 2014 - 07:51).
  • You are viewing the most recent version of this article.
Copyright & Usage 
©2014 American Association for Cancer Research.

Author Information

  1. Brian D. Crompton1,
  2. Chip Stewart2,
  3. Amaro Taylor-Weiner2,
  4. Gabriela Alexe1,2,3,
  5. Kyle C. Kurek4,
  6. Monica L. Calicchio4,
  7. Adam Kiezun2,
  8. Scott L. Carter2,
  9. Sachet A. Shukla5,
  10. Swapnil S. Mehta1,
  11. Aaron R. Thorner1,
  12. Carmen de Torres6,
  13. Cinzia Lavarino6,
  14. Mariona Suñol6,
  15. Aaron McKenna2,
  16. Andrey Sivachenko2,
  17. Kristian Cibulskis2,
  18. Michael S. Lawrence2,
  19. Petar Stojanov2,7,
  20. Mara Rosenberg2,
  21. Lauren Ambrogio2,
  22. Daniel Auclair2,
  23. Sara Seepo2,
  24. Brendan Blumenstiel2,
  25. Matthew DeFelice2,
  26. Ivan Imaz-Rosshandler8,
  27. Angela Schwarz-Cruz y Celis8,
  28. Miguel N. Rivera2,9,
  29. Carlos Rodriguez-Galindo1,
  30. Mark D. Fleming4,
  31. Todd R. Golub1,2,
  32. Gad Getz2,9,10,
  33. Jaume Mora6 and
  34. Kimberly Stegmaier1,2,*
  1. 1Department of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts.
  2. 2Eli and Edythe L. Broad Institute, Cambridge, Massachusetts.
  3. 3Bioinformatics Graduate Program, Boston University, Boston, Massachusetts.
  4. 4Department of Pathology, Boston Children's Hospital, Boston, Massachusetts.
  5. 5Cancer Vaccine Center, Dana-Farber Cancer Institute, Boston, Massachusetts.
  6. 6Department of Pediatric Oncology, Hospital Sant Joan de Déu, Barcelona, Spain.
  7. 7Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts.
  8. 8Instituto Nacional de Medicina Genómica, Mexico City, Mexico.
  9. 9Department of Pathology, Massachusetts General Hospital, Boston, Massachusetts.
  10. 10Massachusetts General Hospital Cancer Center, Massachusetts General Hospital, Boston, Massachusetts.
  1. ↵*Corresponding Author:
    Kimberly Stegmaier, Dana-Farber Cancer Institute, 450 Brookline Avenue, D630, Boston, MA 02215. Phone: 617-632-4438; Fax: 617-632-4850; E-mail: kimberly_stegmaier{at}dfci.harvard.edu
  1. B.D. Crompton and C. Stewart contributed equally to this article.

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Cancer Discovery: 4 (11)
November 2014
Volume 4, Issue 11
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The Genomic Landscape of Pediatric Ewing Sarcoma
Brian D. Crompton, Chip Stewart, Amaro Taylor-Weiner, Gabriela Alexe, Kyle C. Kurek, Monica L. Calicchio, Adam Kiezun, Scott L. Carter, Sachet A. Shukla, Swapnil S. Mehta, Aaron R. Thorner, Carmen de Torres, Cinzia Lavarino, Mariona Suñol, Aaron McKenna, Andrey Sivachenko, Kristian Cibulskis, Michael S. Lawrence, Petar Stojanov, Mara Rosenberg, Lauren Ambrogio, Daniel Auclair, Sara Seepo, Brendan Blumenstiel, Matthew DeFelice, Ivan Imaz-Rosshandler, Angela Schwarz-Cruz y Celis, Miguel N. Rivera, Carlos Rodriguez-Galindo, Mark D. Fleming, Todd R. Golub, Gad Getz, Jaume Mora and Kimberly Stegmaier
Cancer Discov November 1 2014 (4) (11) 1326-1341; DOI: 10.1158/2159-8290.CD-13-1037

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The Genomic Landscape of Pediatric Ewing Sarcoma
Brian D. Crompton, Chip Stewart, Amaro Taylor-Weiner, Gabriela Alexe, Kyle C. Kurek, Monica L. Calicchio, Adam Kiezun, Scott L. Carter, Sachet A. Shukla, Swapnil S. Mehta, Aaron R. Thorner, Carmen de Torres, Cinzia Lavarino, Mariona Suñol, Aaron McKenna, Andrey Sivachenko, Kristian Cibulskis, Michael S. Lawrence, Petar Stojanov, Mara Rosenberg, Lauren Ambrogio, Daniel Auclair, Sara Seepo, Brendan Blumenstiel, Matthew DeFelice, Ivan Imaz-Rosshandler, Angela Schwarz-Cruz y Celis, Miguel N. Rivera, Carlos Rodriguez-Galindo, Mark D. Fleming, Todd R. Golub, Gad Getz, Jaume Mora and Kimberly Stegmaier
Cancer Discov November 1 2014 (4) (11) 1326-1341; DOI: 10.1158/2159-8290.CD-13-1037
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